Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.92■□□□□ 0.3
Rrp1P56183 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rrp1P56183 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.91■□□□□ 0.3
Rrp1P56183 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.91■□□□□ 0.3
Rrp1P56183 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.91■□□□□ 0.3
Rrp1P56183 Gm6296-201ENSMUST00000222599 943 ntBASIC16.91■□□□□ 0.3
Rrp1P56183 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Rrp1P56183 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rrp1P56183 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rrp1P56183 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rrp1P56183 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.91■□□□□ 0.3
Rrp1P56183 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rrp1P56183 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rrp1P56183 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Rrp1P56183 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.9■□□□□ 0.3
Rrp1P56183 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Gm28033-201ENSMUST00000184224 96 ntBASIC16.9■□□□□ 0.3
Rrp1P56183 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
Rrp1P56183 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rrp1P56183 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.9■□□□□ 0.3
Rrp1P56183 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp1P56183 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rrp1P56183 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.89■□□□□ 0.3
Rrp1P56183 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rrp1P56183 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rrp1P56183 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rrp1P56183 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rrp1P56183 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.89■□□□□ 0.29
Rrp1P56183 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rrp1P56183 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rrp1P56183 Gm12644-201ENSMUST00000119935 606 ntBASIC16.89■□□□□ 0.29
Rrp1P56183 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.89■□□□□ 0.29
Rrp1P56183 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.89■□□□□ 0.29
Rrp1P56183 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.89■□□□□ 0.29
Rrp1P56183 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rrp1P56183 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp1P56183 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rrp1P56183 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.89■□□□□ 0.29
Rrp1P56183 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.88■□□□□ 0.29
Rrp1P56183 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Rrp1P56183 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rrp1P56183 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp1P56183 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.88■□□□□ 0.29
Rrp1P56183 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms