Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm8097-201ENSMUST00000117903 829 ntBASIC13.67□□□□□ -0.22
Cdh11P55288 Gm4459-201ENSMUST00000118750 468 ntBASIC13.67□□□□□ -0.22
Cdh11P55288 Gm13418-201ENSMUST00000119097 944 ntBASIC13.67□□□□□ -0.22
Cdh11P55288 Gm15173-201ENSMUST00000122049 433 ntBASIC13.67□□□□□ -0.22
Cdh11P55288 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Cdh11P55288 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdh11P55288 AW822252-206ENSMUST00000208904 237 ntBASIC13.67□□□□□ -0.22
Cdh11P55288 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.67□□□□□ -0.22
Cdh11P55288 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdh11P55288 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.67□□□□□ -0.22
Cdh11P55288 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.67□□□□□ -0.22
Cdh11P55288 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh11P55288 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdh11P55288 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cdh11P55288 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdh11P55288 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdh11P55288 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.66□□□□□ -0.22
Cdh11P55288 Gm25406-201ENSMUST00000157599 105 ntBASIC13.66□□□□□ -0.22
Cdh11P55288 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.66□□□□□ -0.22
Cdh11P55288 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdh11P55288 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdh11P55288 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdh11P55288 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdh11P55288 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdh11P55288 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh11P55288 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdh11P55288 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Cdh11P55288 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdh11P55288 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cdh11P55288 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdh11P55288 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.65□□□□□ -0.22
Cdh11P55288 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Cdh11P55288 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Gm25990-201ENSMUST00000102440 86 ntBASIC13.65□□□□□ -0.22
Cdh11P55288 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cdh11P55288 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdh11P55288 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdh11P55288 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Cdh11P55288 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cdh11P55288 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdh11P55288 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cdh11P55288 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cdh11P55288 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdh11P55288 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.64□□□□□ -0.23
Cdh11P55288 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.64□□□□□ -0.23
Cdh11P55288 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdh11P55288 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms