Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.99□□□□□ -0.01
Fdft1P53798 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Fdft1P53798 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Fdft1P53798 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Fdft1P53798 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Fdft1P53798 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.98□□□□□ -0.01
Fdft1P53798 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Fdft1P53798 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.98□□□□□ -0.01
Fdft1P53798 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.98□□□□□ -0.01
Fdft1P53798 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.98□□□□□ -0.01
Fdft1P53798 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.98□□□□□ -0.01
Fdft1P53798 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Fdft1P53798 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fdft1P53798 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.98□□□□□ -0.01
Fdft1P53798 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Fdft1P53798 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.97□□□□□ -0.01
Fdft1P53798 Gm12134-201ENSMUST00000122109 520 ntBASIC14.97□□□□□ -0.01
Fdft1P53798 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Fdft1P53798 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Fdft1P53798 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Fdft1P53798 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Fdft1P53798 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Fdft1P53798 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.96□□□□□ -0.01
Fdft1P53798 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.96□□□□□ -0.01
Fdft1P53798 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Gm15173-201ENSMUST00000122049 433 ntBASIC14.96□□□□□ -0.01
Fdft1P53798 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Fdft1P53798 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Gm5864-201ENSMUST00000202263 970 ntBASIC14.96□□□□□ -0.01
Fdft1P53798 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Fdft1P53798 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Fdft1P53798 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms