Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sox1P53783 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sox1P53783 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.23■□□□□ 0.03
Sox1P53783 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sox1P53783 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.22■□□□□ 0.03
Sox1P53783 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox1P53783 Mir5132-201ENSMUST00000175166 71 ntBASIC15.22■□□□□ 0.03
Sox1P53783 AA619741-201ENSMUST00000195095 646 ntBASIC15.22■□□□□ 0.03
Sox1P53783 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox1P53783 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.22■□□□□ 0.03
Sox1P53783 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox1P53783 Gm7399-201ENSMUST00000032395 858 ntBASIC15.22■□□□□ 0.03
Sox1P53783 Gm24526-201ENSMUST00000082921 158 ntBASIC15.22■□□□□ 0.03
Sox1P53783 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sox1P53783 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox1P53783 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sox1P53783 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox1P53783 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.21■□□□□ 0.03
Sox1P53783 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.21■□□□□ 0.03
Sox1P53783 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sox1P53783 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Sox1P53783 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.21■□□□□ 0.03
Sox1P53783 Gm12341-201ENSMUST00000119724 503 ntBASIC15.21■□□□□ 0.03
Sox1P53783 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.21■□□□□ 0.03
Sox1P53783 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.21■□□□□ 0.03
Sox1P53783 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.21■□□□□ 0.03
Sox1P53783 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Sox1P53783 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox1P53783 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sox1P53783 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.02
Sox1P53783 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.21■□□□□ 0.02
Sox1P53783 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox1P53783 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox1P53783 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Sox1P53783 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox1P53783 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sox1P53783 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.2■□□□□ 0.02
Sox1P53783 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Sox1P53783 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sox1P53783 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.2■□□□□ 0.02
Sox1P53783 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.2■□□□□ 0.02
Sox1P53783 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox1P53783 Gm27731-201ENSMUST00000185192 107 ntBASIC15.2■□□□□ 0.02
Sox1P53783 Gm37714-201ENSMUST00000194742 342 ntBASIC15.2■□□□□ 0.02
Sox1P53783 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.2■□□□□ 0.02
Sox1P53783 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox1P53783 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sox1P53783 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sox1P53783 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sox1P53783 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox1P53783 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox1P53783 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox1P53783 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms