Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pdx1P52946 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.81□□□□□ -0.04
Pdx1P52946 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.81□□□□□ -0.04
Pdx1P52946 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.81□□□□□ -0.04
Pdx1P52946 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.81□□□□□ -0.04
Pdx1P52946 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.81□□□□□ -0.04
Pdx1P52946 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.81□□□□□ -0.04
Pdx1P52946 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.81□□□□□ -0.04
Pdx1P52946 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdx1P52946 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.8□□□□□ -0.04
Pdx1P52946 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.8□□□□□ -0.04
Pdx1P52946 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pdx1P52946 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.8□□□□□ -0.04
Pdx1P52946 Gm45747-201ENSMUST00000212203 999 ntBASIC14.8□□□□□ -0.04
Pdx1P52946 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pdx1P52946 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.8□□□□□ -0.04
Pdx1P52946 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdx1P52946 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.8□□□□□ -0.04
Pdx1P52946 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.79□□□□□ -0.04
Pdx1P52946 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Pdx1P52946 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Gm16198-201ENSMUST00000118766 670 ntBASIC14.79□□□□□ -0.04
Pdx1P52946 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.79□□□□□ -0.04
Pdx1P52946 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.79□□□□□ -0.04
Pdx1P52946 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.79□□□□□ -0.04
Pdx1P52946 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pdx1P52946 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Gm43514-201ENSMUST00000198852 424 ntBASIC14.79□□□□□ -0.04
Pdx1P52946 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.79□□□□□ -0.04
Pdx1P52946 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.79□□□□□ -0.04
Pdx1P52946 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.79□□□□□ -0.04
Pdx1P52946 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdx1P52946 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pdx1P52946 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pdx1P52946 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.78□□□□□ -0.04
Pdx1P52946 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pdx1P52946 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdx1P52946 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.78□□□□□ -0.04
Pdx1P52946 Gm14494-201ENSMUST00000118786 435 ntBASIC14.78□□□□□ -0.04
Pdx1P52946 Gm15467-201ENSMUST00000120582 445 ntBASIC14.78□□□□□ -0.04
Pdx1P52946 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms