Protein–RNA interactions for Protein: P50571

Gabrb1, Gamma-aminobutyric acid receptor subunit beta-1, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrb1P50571 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gabrb1P50571 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Gm11950-201ENSMUST00000121615 838 ntBASIC13.3□□□□□ -0.28
Gabrb1P50571 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.3□□□□□ -0.28
Gabrb1P50571 Gm44454-201ENSMUST00000198541 138 ntBASIC13.3□□□□□ -0.28
Gabrb1P50571 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.3□□□□□ -0.28
Gabrb1P50571 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.3□□□□□ -0.28
Gabrb1P50571 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Gabrb1P50571 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.3□□□□□ -0.28
Gabrb1P50571 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.3□□□□□ -0.28
Gabrb1P50571 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Gabrb1P50571 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabrb1P50571 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.3□□□□□ -0.28
Gabrb1P50571 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Gabrb1P50571 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.29□□□□□ -0.28
Gabrb1P50571 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gabrb1P50571 Gm6433-201ENSMUST00000118634 875 ntBASIC13.29□□□□□ -0.28
Gabrb1P50571 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.29□□□□□ -0.28
Gabrb1P50571 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Gabrb1P50571 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gabrb1P50571 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Gabrb1P50571 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.29□□□□□ -0.28
Gabrb1P50571 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gabrb1P50571 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.29□□□□□ -0.28
Gabrb1P50571 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabrb1P50571 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Gabrb1P50571 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.28□□□□□ -0.28
Gabrb1P50571 Gm15565-201ENSMUST00000118890 427 ntBASIC13.28□□□□□ -0.28
Gabrb1P50571 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.28□□□□□ -0.28
Gabrb1P50571 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.28□□□□□ -0.28
Gabrb1P50571 Rprl3-201ENSMUST00000157400 290 ntBASIC13.28□□□□□ -0.28
Gabrb1P50571 Mir3081-201ENSMUST00000175305 84 ntBASIC13.28□□□□□ -0.28
Gabrb1P50571 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.28□□□□□ -0.28
Gabrb1P50571 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Gabrb1P50571 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.28□□□□□ -0.28
Gabrb1P50571 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabrb1P50571 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabrb1P50571 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabrb1P50571 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gabrb1P50571 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms