Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Brca1P48754 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Brca1P48754 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.58■□□□□ 0.24
Brca1P48754 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.58■□□□□ 0.24
Brca1P48754 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.58■□□□□ 0.24
Brca1P48754 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Brca1P48754 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.58■□□□□ 0.24
Brca1P48754 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Brca1P48754 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.57■□□□□ 0.24
Brca1P48754 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Brca1P48754 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Brca1P48754 Gm8749-201ENSMUST00000117737 331 ntBASIC16.57■□□□□ 0.24
Brca1P48754 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.57■□□□□ 0.24
Brca1P48754 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.57■□□□□ 0.24
Brca1P48754 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.57■□□□□ 0.24
Brca1P48754 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Brca1P48754 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Brca1P48754 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Brca1P48754 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Brca1P48754 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Brca1P48754 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Brca1P48754 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Brca1P48754 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Brca1P48754 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.56■□□□□ 0.24
Brca1P48754 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.56■□□□□ 0.24
Brca1P48754 Mir1982-201ENSMUST00000157368 74 ntBASIC16.56■□□□□ 0.24
Brca1P48754 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Gm5354-201ENSMUST00000182417 973 ntBASIC16.56■□□□□ 0.24
Brca1P48754 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.56■□□□□ 0.24
Brca1P48754 Gm9182-201ENSMUST00000217829 639 ntBASIC16.56■□□□□ 0.24
Brca1P48754 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.56■□□□□ 0.24
Brca1P48754 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.56■□□□□ 0.24
Brca1P48754 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Brca1P48754 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.56■□□□□ 0.24
Brca1P48754 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.56■□□□□ 0.24
Brca1P48754 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.56■□□□□ 0.24
Brca1P48754 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.56■□□□□ 0.24
Brca1P48754 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Brca1P48754 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Brca1P48754 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Brca1P48754 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.55■□□□□ 0.24
Brca1P48754 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Brca1P48754 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.55■□□□□ 0.24
Brca1P48754 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Gm6916-202ENSMUST00000205523 195 ntBASIC16.55■□□□□ 0.24
Brca1P48754 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.55■□□□□ 0.24
Brca1P48754 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Brca1P48754 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.55■□□□□ 0.24
Brca1P48754 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Brca1P48754 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Brca1P48754 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.54■□□□□ 0.24
Brca1P48754 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Brca1P48754 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Brca1P48754 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.54■□□□□ 0.24
Brca1P48754 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Brca1P48754 Gm10478-201ENSMUST00000084451 396 ntBASIC16.54■□□□□ 0.24
Brca1P48754 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms