Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.36□□□□□ -0.11
Sox18P43680 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Sox18P43680 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC14.36□□□□□ -0.11
Sox18P43680 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Gm23984-201ENSMUST00000157139 203 ntBASIC14.36□□□□□ -0.11
Sox18P43680 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Gm24694-201ENSMUST00000180054 110 ntBASIC14.36□□□□□ -0.11
Sox18P43680 Gm27663-201ENSMUST00000184839 110 ntBASIC14.36□□□□□ -0.11
Sox18P43680 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Gm6007-201ENSMUST00000208170 823 ntBASIC14.36□□□□□ -0.11
Sox18P43680 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sox18P43680 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox18P43680 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sox18P43680 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.36□□□□□ -0.11
Sox18P43680 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sox18P43680 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox18P43680 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.35□□□□□ -0.11
Sox18P43680 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Sox18P43680 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.35□□□□□ -0.11
Sox18P43680 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.35□□□□□ -0.11
Sox18P43680 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.35□□□□□ -0.11
Sox18P43680 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.35□□□□□ -0.11
Sox18P43680 Gm44344-201ENSMUST00000200287 129 ntBASIC14.35□□□□□ -0.11
Sox18P43680 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Gm6180-201ENSMUST00000065243 498 ntBASIC14.35□□□□□ -0.11
Sox18P43680 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox18P43680 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox18P43680 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sox18P43680 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.35□□□□□ -0.11
Sox18P43680 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.35□□□□□ -0.11
Sox18P43680 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox18P43680 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sox18P43680 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.34□□□□□ -0.11
Sox18P43680 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Sox18P43680 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Gm13015-201ENSMUST00000118674 204 ntBASIC14.34□□□□□ -0.11
Sox18P43680 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox18P43680 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.34□□□□□ -0.11
Sox18P43680 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sox18P43680 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox18P43680 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox18P43680 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox18P43680 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox18P43680 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox18P43680 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox18P43680 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox18P43680 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox18P43680 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox18P43680 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox18P43680 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms