Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Mmp9P41245 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.61□□□□□ -0.39
Mmp9P41245 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Gm10052-201ENSMUST00000168019 960 ntBASIC12.61□□□□□ -0.39
Mmp9P41245 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.61□□□□□ -0.39
Mmp9P41245 Gm44430-201ENSMUST00000203376 995 ntBASIC12.61□□□□□ -0.39
Mmp9P41245 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.61□□□□□ -0.39
Mmp9P41245 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.61□□□□□ -0.39
Mmp9P41245 Gm7729-201ENSMUST00000050143 801 ntBASIC12.61□□□□□ -0.39
Mmp9P41245 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mmp9P41245 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Mmp9P41245 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Mmp9P41245 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.61□□□□□ -0.39
Mmp9P41245 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Mmp9P41245 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp9P41245 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Mmp9P41245 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.6□□□□□ -0.39
Mmp9P41245 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Gm5867-201ENSMUST00000063197 592 ntBASIC12.6□□□□□ -0.39
Mmp9P41245 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp9P41245 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Mmp9P41245 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.59□□□□□ -0.39
Mmp9P41245 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.59□□□□□ -0.39
Mmp9P41245 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.59□□□□□ -0.39
Mmp9P41245 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.59□□□□□ -0.39
Mmp9P41245 Gm18669-201ENSMUST00000216049 778 ntBASIC12.59□□□□□ -0.39
Mmp9P41245 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Mmp9P41245 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Mmp9P41245 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp9P41245 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Mmp9P41245 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Mmp9P41245 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Mmp9P41245 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Mmp9P41245 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Mmp9P41245 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp9P41245 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.58□□□□□ -0.4
Mmp9P41245 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.58□□□□□ -0.4
Mmp9P41245 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.58□□□□□ -0.4
Mmp9P41245 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms