Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Upk2P38575 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.14□□□□□ -0.31
Upk2P38575 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Upk2P38575 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Upk2P38575 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Upk2P38575 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Upk2P38575 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Upk2P38575 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Upk2P38575 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.13□□□□□ -0.31
Upk2P38575 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.13□□□□□ -0.31
Upk2P38575 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.13□□□□□ -0.31
Upk2P38575 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Upk2P38575 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Upk2P38575 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Upk2P38575 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Upk2P38575 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Upk2P38575 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.12□□□□□ -0.31
Upk2P38575 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.12□□□□□ -0.31
Upk2P38575 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.12□□□□□ -0.31
Upk2P38575 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.12□□□□□ -0.31
Upk2P38575 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.12□□□□□ -0.31
Upk2P38575 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Upk2P38575 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Upk2P38575 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Upk2P38575 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk2P38575 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.11□□□□□ -0.31
Upk2P38575 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Upk2P38575 Gm12008-201ENSMUST00000117791 755 ntBASIC13.11□□□□□ -0.31
Upk2P38575 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Upk2P38575 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.11□□□□□ -0.31
Upk2P38575 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.11□□□□□ -0.31
Upk2P38575 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.11□□□□□ -0.31
Upk2P38575 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Upk2P38575 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Upk2P38575 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk2P38575 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms