Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nedd8P29595 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.88□□□□□ -0.19
Nedd8P29595 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.88□□□□□ -0.19
Nedd8P29595 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.88□□□□□ -0.19
Nedd8P29595 Gm7370-201ENSMUST00000219471 767 ntBASIC13.88□□□□□ -0.19
Nedd8P29595 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Gm10566-201ENSMUST00000086739 996 ntBASIC13.88□□□□□ -0.19
Nedd8P29595 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Nedd8P29595 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nedd8P29595 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.88□□□□□ -0.19
Nedd8P29595 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.88□□□□□ -0.19
Nedd8P29595 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.87□□□□□ -0.19
Nedd8P29595 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nedd8P29595 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.87□□□□□ -0.19
Nedd8P29595 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.87□□□□□ -0.19
Nedd8P29595 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.87□□□□□ -0.19
Nedd8P29595 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nedd8P29595 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nedd8P29595 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nedd8P29595 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nedd8P29595 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.86□□□□□ -0.19
Nedd8P29595 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nedd8P29595 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.86□□□□□ -0.19
Nedd8P29595 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nedd8P29595 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nedd8P29595 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Nedd8P29595 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nedd8P29595 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Nedd8P29595 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.85□□□□□ -0.19
Nedd8P29595 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.85□□□□□ -0.19
Nedd8P29595 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.85□□□□□ -0.19
Nedd8P29595 Trmt13-210ENSMUST00000198454 880 ntBASIC13.85□□□□□ -0.19
Nedd8P29595 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.85□□□□□ -0.19
Nedd8P29595 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.85□□□□□ -0.19
Nedd8P29595 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nedd8P29595 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nedd8P29595 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Nedd8P29595 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nedd8P29595 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms