Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pde6aP27664 Gm17271-201ENSMUST00000165535 355 ntBASIC17.36■□□□□ 0.37
Pde6aP27664 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.36■□□□□ 0.37
Pde6aP27664 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pde6aP27664 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pde6aP27664 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pde6aP27664 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Pde6aP27664 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.35■□□□□ 0.37
Pde6aP27664 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pde6aP27664 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.35■□□□□ 0.37
Pde6aP27664 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pde6aP27664 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.35■□□□□ 0.37
Pde6aP27664 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.35■□□□□ 0.37
Pde6aP27664 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pde6aP27664 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pde6aP27664 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pde6aP27664 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.35■□□□□ 0.37
Pde6aP27664 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.35■□□□□ 0.37
Pde6aP27664 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6aP27664 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pde6aP27664 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.34■□□□□ 0.37
Pde6aP27664 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
Pde6aP27664 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.34■□□□□ 0.37
Pde6aP27664 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6aP27664 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6aP27664 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6aP27664 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6aP27664 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6aP27664 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6aP27664 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6aP27664 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6aP27664 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pde6aP27664 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.33■□□□□ 0.36
Pde6aP27664 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pde6aP27664 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.33■□□□□ 0.36
Pde6aP27664 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.33■□□□□ 0.36
Pde6aP27664 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pde6aP27664 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pde6aP27664 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pde6aP27664 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.32■□□□□ 0.36
Pde6aP27664 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pde6aP27664 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.32■□□□□ 0.36
Pde6aP27664 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.32■□□□□ 0.36
Pde6aP27664 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.32■□□□□ 0.36
Pde6aP27664 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.32■□□□□ 0.36
Pde6aP27664 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.32■□□□□ 0.36
Pde6aP27664 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6aP27664 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms