Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
P06344 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.35□□□□□ -0.27
P06344 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P06344 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.34□□□□□ -0.27
P06344 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.34□□□□□ -0.27
P06344 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
P06344 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
P06344 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Gm16198-201ENSMUST00000118766 670 ntBASIC13.34□□□□□ -0.27
P06344 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.34□□□□□ -0.27
P06344 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
P06344 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.34□□□□□ -0.27
P06344 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.34□□□□□ -0.27
P06344 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.34□□□□□ -0.27
P06344 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P06344 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
P06344 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
P06344 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
P06344 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
P06344 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
P06344 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
P06344 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.33□□□□□ -0.27
P06344 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P06344 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.33□□□□□ -0.28
P06344 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.33□□□□□ -0.28
P06344 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.33□□□□□ -0.28
P06344 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P06344 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.33□□□□□ -0.28
P06344 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
P06344 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P06344 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P06344 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.32□□□□□ -0.28
P06344 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.32□□□□□ -0.28
P06344 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.32□□□□□ -0.28
P06344 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.32□□□□□ -0.28
P06344 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.32□□□□□ -0.28
P06344 Gm2272-201ENSMUST00000194903 582 ntBASIC13.32□□□□□ -0.28
P06344 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.32□□□□□ -0.28
P06344 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.32□□□□□ -0.28
P06344 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.32□□□□□ -0.28
P06344 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.32□□□□□ -0.28
P06344 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.32□□□□□ -0.28
P06344 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
P06344 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P06344 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms