Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.05■□□□□ 0.16
Chrna1P04756 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Chrna1P04756 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.05■□□□□ 0.16
Chrna1P04756 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Chrna1P04756 Gm13223-201ENSMUST00000118609 747 ntBASIC16.05■□□□□ 0.16
Chrna1P04756 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Chrna1P04756 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Gm5479-201ENSMUST00000160578 435 ntBASIC16.05■□□□□ 0.16
Chrna1P04756 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.05■□□□□ 0.16
Chrna1P04756 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.05■□□□□ 0.16
Chrna1P04756 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Chrna1P04756 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.05■□□□□ 0.16
Chrna1P04756 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Chrna1P04756 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chrna1P04756 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.04■□□□□ 0.16
Chrna1P04756 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.04■□□□□ 0.16
Chrna1P04756 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.04■□□□□ 0.16
Chrna1P04756 Gm27622-201ENSMUST00000183779 60 ntBASIC16.04■□□□□ 0.16
Chrna1P04756 Mir7023-201ENSMUST00000185093 64 ntBASIC16.04■□□□□ 0.16
Chrna1P04756 Gm18766-201ENSMUST00000189811 808 ntBASIC16.04■□□□□ 0.16
Chrna1P04756 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.04■□□□□ 0.16
Chrna1P04756 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.04■□□□□ 0.16
Chrna1P04756 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.04■□□□□ 0.16
Chrna1P04756 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.04■□□□□ 0.16
Chrna1P04756 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Chrna1P04756 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chrna1P04756 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Chrna1P04756 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chrna1P04756 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Chrna1P04756 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.03■□□□□ 0.16
Chrna1P04756 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.03■□□□□ 0.16
Chrna1P04756 Gm18049-201ENSMUST00000208909 581 ntBASIC16.03■□□□□ 0.16
Chrna1P04756 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.03■□□□□ 0.16
Chrna1P04756 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chrna1P04756 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna1P04756 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.02■□□□□ 0.16
Chrna1P04756 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna1P04756 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Chrna1P04756 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.02■□□□□ 0.16
Chrna1P04756 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Chrna1P04756 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Chrna1P04756 Gm13464-201ENSMUST00000119418 935 ntBASIC16.02■□□□□ 0.16
Chrna1P04756 Gm14057-201ENSMUST00000120631 482 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms