Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Carlr-201ENSMUST00000181515 2574 ntBASIC10.58□□□□□ -0.72
Hbb-b1P02088 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hbb-b1P02088 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.57□□□□□ -0.72
Hbb-b1P02088 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Gm13158-201ENSMUST00000122007 736 ntBASIC10.57□□□□□ -0.72
Hbb-b1P02088 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.57□□□□□ -0.72
Hbb-b1P02088 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hbb-b1P02088 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.57□□□□□ -0.72
Hbb-b1P02088 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Hbb-b1P02088 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.56□□□□□ -0.72
Hbb-b1P02088 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hbb-b1P02088 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms