Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.37■□□□□ 0.05
Syn1O88935 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Syn1O88935 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Syn1O88935 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.36■□□□□ 0.05
Syn1O88935 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Syn1O88935 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.36■□□□□ 0.05
Syn1O88935 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Syn1O88935 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.36■□□□□ 0.05
Syn1O88935 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.36■□□□□ 0.05
Syn1O88935 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Syn1O88935 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Gm45841-201ENSMUST00000207700 164 ntBASIC15.36■□□□□ 0.05
Syn1O88935 Gm45331-201ENSMUST00000209868 554 ntBASIC15.36■□□□□ 0.05
Syn1O88935 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Syn1O88935 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Syn1O88935 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Syn1O88935 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Syn1O88935 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Syn1O88935 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Gm15806-201ENSMUST00000120696 955 ntBASIC15.35■□□□□ 0.05
Syn1O88935 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
Syn1O88935 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
Syn1O88935 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.35■□□□□ 0.05
Syn1O88935 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.35■□□□□ 0.05
Syn1O88935 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Syn1O88935 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Syn1O88935 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.35■□□□□ 0.05
Syn1O88935 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Syn1O88935 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Syn1O88935 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.34■□□□□ 0.05
Syn1O88935 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Syn1O88935 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.34■□□□□ 0.05
Syn1O88935 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.34■□□□□ 0.05
Syn1O88935 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Gm22189-201ENSMUST00000103822 86 ntBASIC15.34■□□□□ 0.05
Syn1O88935 Gm4984-201ENSMUST00000115987 360 ntBASIC15.34■□□□□ 0.05
Syn1O88935 Mir1897-201ENSMUST00000122581 272 ntBASIC15.34■□□□□ 0.05
Syn1O88935 Gm9719-201ENSMUST00000162765 543 ntBASIC15.34■□□□□ 0.05
Syn1O88935 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Syn1O88935 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.34■□□□□ 0.05
Syn1O88935 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.34■□□□□ 0.05
Syn1O88935 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Syn1O88935 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.34■□□□□ 0.05
Syn1O88935 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms