Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apaf1O88879 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Apaf1O88879 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Apaf1O88879 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Apaf1O88879 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Apaf1O88879 Gm6973-201ENSMUST00000117080 721 ntBASIC19.46■□□□□ 0.71
Apaf1O88879 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.46■□□□□ 0.71
Apaf1O88879 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.46■□□□□ 0.71
Apaf1O88879 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apaf1O88879 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Apaf1O88879 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.46■□□□□ 0.71
Apaf1O88879 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apaf1O88879 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Apaf1O88879 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Apaf1O88879 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apaf1O88879 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Apaf1O88879 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apaf1O88879 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Apaf1O88879 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.46■□□□□ 0.71
Apaf1O88879 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
Apaf1O88879 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC19.46■□□□□ 0.71
Apaf1O88879 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Apaf1O88879 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Apaf1O88879 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apaf1O88879 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Apaf1O88879 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.44■□□□□ 0.7
Apaf1O88879 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.44■□□□□ 0.7
Apaf1O88879 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apaf1O88879 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apaf1O88879 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apaf1O88879 Gm18889-201ENSMUST00000174284 929 ntBASIC19.44■□□□□ 0.7
Apaf1O88879 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.44■□□□□ 0.7
Apaf1O88879 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Apaf1O88879 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Apaf1O88879 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.44■□□□□ 0.7
Apaf1O88879 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Apaf1O88879 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apaf1O88879 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC19.43■□□□□ 0.7
Apaf1O88879 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Apaf1O88879 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Apaf1O88879 Gm18057-201ENSMUST00000208220 503 ntBASIC19.43■□□□□ 0.7
Apaf1O88879 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.43■□□□□ 0.7
Apaf1O88879 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.43■□□□□ 0.7
Apaf1O88879 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Apaf1O88879 AC174678.1-201ENSMUST00000228007 2749 ntBASIC19.43■□□□□ 0.7
Apaf1O88879 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.43■□□□□ 0.7
Apaf1O88879 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apaf1O88879 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Apaf1O88879 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Apaf1O88879 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.42■□□□□ 0.7
Apaf1O88879 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Apaf1O88879 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.42■□□□□ 0.7
Apaf1O88879 Rprl2-201ENSMUST00000157150 290 ntBASIC19.42■□□□□ 0.7
Apaf1O88879 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.42■□□□□ 0.7
Apaf1O88879 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.42■□□□□ 0.7
Apaf1O88879 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.42■□□□□ 0.7
Apaf1O88879 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Apaf1O88879 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apaf1O88879 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms