Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcnkO88874 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CcnkO88874 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcnkO88874 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcnkO88874 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcnkO88874 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcnkO88874 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CcnkO88874 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CcnkO88874 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CcnkO88874 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CcnkO88874 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.37□□□□□ -0.27
CcnkO88874 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CcnkO88874 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.37□□□□□ -0.27
CcnkO88874 Gm6257-201ENSMUST00000163864 910 ntBASIC13.37□□□□□ -0.27
CcnkO88874 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CcnkO88874 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CcnkO88874 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CcnkO88874 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CcnkO88874 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CcnkO88874 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CcnkO88874 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.36□□□□□ -0.27
CcnkO88874 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CcnkO88874 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.36□□□□□ -0.27
CcnkO88874 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CcnkO88874 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CcnkO88874 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CcnkO88874 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CcnkO88874 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CcnkO88874 Gm25406-201ENSMUST00000157599 105 ntBASIC13.35□□□□□ -0.27
CcnkO88874 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.35□□□□□ -0.27
CcnkO88874 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.35□□□□□ -0.27
CcnkO88874 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CcnkO88874 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms