Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cldn1O88551 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.86□□□□□ -0.35
Cldn1O88551 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Cldn1O88551 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Gm12008-201ENSMUST00000117791 755 ntBASIC12.86□□□□□ -0.35
Cldn1O88551 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.86□□□□□ -0.35
Cldn1O88551 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cldn1O88551 Gm38294-201ENSMUST00000192831 381 ntBASIC12.86□□□□□ -0.35
Cldn1O88551 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.86□□□□□ -0.35
Cldn1O88551 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.86□□□□□ -0.35
Cldn1O88551 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.86□□□□□ -0.35
Cldn1O88551 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cldn1O88551 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.86□□□□□ -0.35
Cldn1O88551 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Cldn1O88551 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldn1O88551 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.85□□□□□ -0.35
Cldn1O88551 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cldn1O88551 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Gm25287-201ENSMUST00000103846 110 ntBASIC12.85□□□□□ -0.35
Cldn1O88551 Gm22918-201ENSMUST00000103855 110 ntBASIC12.85□□□□□ -0.35
Cldn1O88551 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.85□□□□□ -0.35
Cldn1O88551 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.85□□□□□ -0.35
Cldn1O88551 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.85□□□□□ -0.35
Cldn1O88551 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.85□□□□□ -0.35
Cldn1O88551 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Gm27618-201ENSMUST00000183671 60 ntBASIC12.85□□□□□ -0.35
Cldn1O88551 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.85□□□□□ -0.35
Cldn1O88551 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.85□□□□□ -0.35
Cldn1O88551 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.85□□□□□ -0.35
Cldn1O88551 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cldn1O88551 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.85□□□□□ -0.35
Cldn1O88551 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cldn1O88551 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.85□□□□□ -0.35
Cldn1O88551 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cldn1O88551 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cldn1O88551 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.84□□□□□ -0.35
Cldn1O88551 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.84□□□□□ -0.35
Cldn1O88551 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cldn1O88551 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cldn1O88551 Gm6257-201ENSMUST00000163864 910 ntBASIC12.84□□□□□ -0.35
Cldn1O88551 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cldn1O88551 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.84□□□□□ -0.35
Cldn1O88551 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cldn1O88551 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Cldn1O88551 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.84□□□□□ -0.35
Cldn1O88551 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldn1O88551 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms