Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Slc4a4O88343 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.65■□□□□ 0.42
Slc4a4O88343 Gm6973-201ENSMUST00000117080 721 ntBASIC17.65■□□□□ 0.42
Slc4a4O88343 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.65■□□□□ 0.42
Slc4a4O88343 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.65■□□□□ 0.42
Slc4a4O88343 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.65■□□□□ 0.42
Slc4a4O88343 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.65■□□□□ 0.42
Slc4a4O88343 Gm15483-201ENSMUST00000120338 456 ntBASIC17.65■□□□□ 0.42
Slc4a4O88343 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.65■□□□□ 0.42
Slc4a4O88343 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.65■□□□□ 0.42
Slc4a4O88343 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.65■□□□□ 0.42
Slc4a4O88343 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slc4a4O88343 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Slc4a4O88343 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slc4a4O88343 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Slc4a4O88343 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.64■□□□□ 0.42
Slc4a4O88343 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc4a4O88343 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Gm14701-201ENSMUST00000117156 348 ntBASIC17.64■□□□□ 0.41
Slc4a4O88343 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Mir6990-201ENSMUST00000183724 91 ntBASIC17.64■□□□□ 0.41
Slc4a4O88343 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.64■□□□□ 0.41
Slc4a4O88343 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.64■□□□□ 0.41
Slc4a4O88343 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Slc4a4O88343 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Slc4a4O88343 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc4a4O88343 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slc4a4O88343 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.63■□□□□ 0.41
Slc4a4O88343 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slc4a4O88343 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.63■□□□□ 0.41
Slc4a4O88343 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Slc4a4O88343 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.63■□□□□ 0.41
Slc4a4O88343 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.63■□□□□ 0.41
Slc4a4O88343 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.63■□□□□ 0.41
Slc4a4O88343 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc4a4O88343 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slc4a4O88343 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slc4a4O88343 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms