Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Nid2O88322 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nid2O88322 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nid2O88322 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Nid2O88322 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC19.27■□□□□ 0.68
Nid2O88322 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC19.27■□□□□ 0.68
Nid2O88322 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nid2O88322 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nid2O88322 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.27■□□□□ 0.68
Nid2O88322 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nid2O88322 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nid2O88322 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nid2O88322 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nid2O88322 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nid2O88322 BC001981-202ENSMUST00000191393 1545 ntBASIC19.27■□□□□ 0.68
Nid2O88322 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nid2O88322 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nid2O88322 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nid2O88322 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nid2O88322 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nid2O88322 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nid2O88322 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nid2O88322 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nid2O88322 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Nid2O88322 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC19.26■□□□□ 0.67
Nid2O88322 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nid2O88322 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nid2O88322 Gm9002-201ENSMUST00000178437 499 ntBASIC19.26■□□□□ 0.67
Nid2O88322 Gm27701-201ENSMUST00000184498 110 ntBASIC19.26■□□□□ 0.67
Nid2O88322 AC121804.3-201ENSMUST00000223420 295 ntBASIC19.26■□□□□ 0.67
Nid2O88322 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nid2O88322 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nid2O88322 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nid2O88322 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nid2O88322 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nid2O88322 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nid2O88322 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nid2O88322 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nid2O88322 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nid2O88322 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.25■□□□□ 0.67
Nid2O88322 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.25■□□□□ 0.67
Nid2O88322 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC19.25■□□□□ 0.67
Nid2O88322 Gm6916-202ENSMUST00000205523 195 ntBASIC19.25■□□□□ 0.67
Nid2O88322 Gm9182-201ENSMUST00000217829 639 ntBASIC19.25■□□□□ 0.67
Nid2O88322 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Nid2O88322 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.25■□□□□ 0.67
Nid2O88322 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.25■□□□□ 0.67
Nid2O88322 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC19.25■□□□□ 0.67
Nid2O88322 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC19.25■□□□□ 0.67
Nid2O88322 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nid2O88322 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC19.25■□□□□ 0.67
Nid2O88322 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 AC139580.1-202ENSMUST00000223574 928 ntBASIC19.25■□□□□ 0.67
Nid2O88322 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nid2O88322 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nid2O88322 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nid2O88322 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nid2O88322 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.24■□□□□ 0.67
Nid2O88322 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nid2O88322 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nid2O88322 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nid2O88322 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nid2O88322 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nid2O88322 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Nid2O88322 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC19.24■□□□□ 0.67
Nid2O88322 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nid2O88322 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nid2O88322 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms