Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr1O70481 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ubr1O70481 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ubr1O70481 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC19.16■□□□□ 0.66
Ubr1O70481 Gm10766-202ENSMUST00000194123 606 ntBASIC19.16■□□□□ 0.66
Ubr1O70481 Gm18018-201ENSMUST00000198273 408 ntBASIC19.16■□□□□ 0.66
Ubr1O70481 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ubr1O70481 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Gm9252-201ENSMUST00000172364 1602 ntBASIC19.16■□□□□ 0.66
Ubr1O70481 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.16■□□□□ 0.66
Ubr1O70481 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ubr1O70481 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Gm28760-201ENSMUST00000185995 736 ntBASIC19.16■□□□□ 0.66
Ubr1O70481 Gm6745-201ENSMUST00000199216 526 ntBASIC19.16■□□□□ 0.66
Ubr1O70481 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.16■□□□□ 0.66
Ubr1O70481 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubr1O70481 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC19.15■□□□□ 0.66
Ubr1O70481 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.15■□□□□ 0.66
Ubr1O70481 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ubr1O70481 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ubr1O70481 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.15■□□□□ 0.66
Ubr1O70481 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ubr1O70481 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ubr1O70481 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ubr1O70481 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ubr1O70481 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ubr1O70481 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ubr1O70481 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.14■□□□□ 0.66
Ubr1O70481 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC19.14■□□□□ 0.66
Ubr1O70481 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.14■□□□□ 0.66
Ubr1O70481 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ubr1O70481 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.14■□□□□ 0.65
Ubr1O70481 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ubr1O70481 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.14■□□□□ 0.65
Ubr1O70481 Gm31326-201ENSMUST00000191856 1048 ntBASIC19.14■□□□□ 0.65
Ubr1O70481 AC162801.1-201ENSMUST00000220612 198 ntBASIC19.14■□□□□ 0.65
Ubr1O70481 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Ubr1O70481 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ubr1O70481 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ubr1O70481 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.13■□□□□ 0.65
Ubr1O70481 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.13■□□□□ 0.65
Ubr1O70481 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC19.13■□□□□ 0.65
Ubr1O70481 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC19.13■□□□□ 0.65
Ubr1O70481 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC19.13■□□□□ 0.65
Ubr1O70481 Gm28631-201ENSMUST00000190740 334 ntBASIC19.13■□□□□ 0.65
Ubr1O70481 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC19.13■□□□□ 0.65
Ubr1O70481 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Ubr1O70481 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ubr1O70481 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ubr1O70481 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms