Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.78□□□□□ -0.04
Pdlim1O70400 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim1O70400 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.77□□□□□ -0.04
Pdlim1O70400 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.77□□□□□ -0.04
Pdlim1O70400 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim1O70400 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pdlim1O70400 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim1O70400 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.77□□□□□ -0.05
Pdlim1O70400 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.77□□□□□ -0.05
Pdlim1O70400 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim1O70400 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim1O70400 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim1O70400 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Pdlim1O70400 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim1O70400 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pdlim1O70400 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Pdlim1O70400 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim1O70400 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Pdlim1O70400 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim1O70400 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pdlim1O70400 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim1O70400 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pdlim1O70400 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdlim1O70400 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim1O70400 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.76□□□□□ -0.05
Pdlim1O70400 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim1O70400 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pdlim1O70400 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.76□□□□□ -0.05
Pdlim1O70400 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim1O70400 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Pdlim1O70400 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim1O70400 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pdlim1O70400 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Pdlim1O70400 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pdlim1O70400 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pdlim1O70400 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.75□□□□□ -0.05
Pdlim1O70400 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.75□□□□□ -0.05
Pdlim1O70400 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.75□□□□□ -0.05
Pdlim1O70400 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.75□□□□□ -0.05
Pdlim1O70400 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.75□□□□□ -0.05
Pdlim1O70400 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim1O70400 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms