Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.2□□□□□ -0.14
Rdh5O55240 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.2□□□□□ -0.14
Rdh5O55240 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.2□□□□□ -0.14
Rdh5O55240 Psmb5-202ENSMUST00000227257 622 ntBASIC14.2□□□□□ -0.14
Rdh5O55240 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rdh5O55240 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rdh5O55240 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rdh5O55240 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.19□□□□□ -0.14
Rdh5O55240 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rdh5O55240 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.19□□□□□ -0.14
Rdh5O55240 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Gm18246-201ENSMUST00000221023 728 ntBASIC14.19□□□□□ -0.14
Rdh5O55240 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.19□□□□□ -0.14
Rdh5O55240 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rdh5O55240 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.19□□□□□ -0.14
Rdh5O55240 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.19□□□□□ -0.14
Rdh5O55240 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rdh5O55240 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rdh5O55240 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rdh5O55240 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.18□□□□□ -0.14
Rdh5O55240 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.18□□□□□ -0.14
Rdh5O55240 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.18□□□□□ -0.14
Rdh5O55240 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Gm27628-201ENSMUST00000184911 107 ntBASIC14.18□□□□□ -0.14
Rdh5O55240 Gm43767-201ENSMUST00000198933 381 ntBASIC14.18□□□□□ -0.14
Rdh5O55240 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.18□□□□□ -0.14
Rdh5O55240 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.18□□□□□ -0.14
Rdh5O55240 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.18□□□□□ -0.14
Rdh5O55240 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rdh5O55240 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.18□□□□□ -0.14
Rdh5O55240 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rdh5O55240 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rdh5O55240 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.18□□□□□ -0.14
Rdh5O55240 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rdh5O55240 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rdh5O55240 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.17□□□□□ -0.14
Rdh5O55240 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rdh5O55240 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.17□□□□□ -0.14
Rdh5O55240 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms