Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.41■□□□□ 0.22
Trdmt1O55055 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.41■□□□□ 0.22
Trdmt1O55055 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm29310-201ENSMUST00000185468 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21825-201ENSMUST00000185728 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm29109-201ENSMUST00000185895 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21896-201ENSMUST00000186520 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21873-201ENSMUST00000186728 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21794-201ENSMUST00000187056 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21880-201ENSMUST00000187275 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21826-201ENSMUST00000187451 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21198-201ENSMUST00000188393 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21749-201ENSMUST00000189343 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21901-201ENSMUST00000189568 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm29424-201ENSMUST00000189716 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm28599-201ENSMUST00000189838 694 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21867-201ENSMUST00000189917 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm29269-201ENSMUST00000190087 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21722-201ENSMUST00000190153 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm28423-201ENSMUST00000190701 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21899-201ENSMUST00000190745 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21910-201ENSMUST00000191163 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21849-201ENSMUST00000191571 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm28678-201ENSMUST00000191593 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm20910-201ENSMUST00000193268 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm21871-201ENSMUST00000194621 696 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.41■□□□□ 0.22
Trdmt1O55055 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.41■□□□□ 0.22
Trdmt1O55055 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.4■□□□□ 0.22
Trdmt1O55055 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.4■□□□□ 0.22
Trdmt1O55055 Gm29667-201ENSMUST00000190817 490 ntBASIC16.4■□□□□ 0.22
Trdmt1O55055 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.4■□□□□ 0.22
Trdmt1O55055 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdmt1O55055 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trdmt1O55055 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Trdmt1O55055 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
Trdmt1O55055 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Trdmt1O55055 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trdmt1O55055 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trdmt1O55055 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trdmt1O55055 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trdmt1O55055 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trdmt1O55055 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdmt1O55055 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms