Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl13O55038 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl13O55038 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cxcl13O55038 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.39
Cxcl13O55038 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Gm9824-201ENSMUST00000178707 561 ntBASIC12.64□□□□□ -0.39
Cxcl13O55038 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.64□□□□□ -0.39
Cxcl13O55038 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl13O55038 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl13O55038 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Cxcl13O55038 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cxcl13O55038 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Cxcl13O55038 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Cxcl13O55038 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Cxcl13O55038 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.63□□□□□ -0.39
Cxcl13O55038 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.63□□□□□ -0.39
Cxcl13O55038 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.63□□□□□ -0.39
Cxcl13O55038 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.63□□□□□ -0.39
Cxcl13O55038 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.63□□□□□ -0.39
Cxcl13O55038 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.63□□□□□ -0.39
Cxcl13O55038 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.63□□□□□ -0.39
Cxcl13O55038 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
Cxcl13O55038 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.63□□□□□ -0.39
Cxcl13O55038 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl13O55038 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.62□□□□□ -0.39
Cxcl13O55038 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl13O55038 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.62□□□□□ -0.39
Cxcl13O55038 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl13O55038 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.62□□□□□ -0.39
Cxcl13O55038 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cxcl13O55038 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.62□□□□□ -0.39
Cxcl13O55038 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl13O55038 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl13O55038 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms