Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Smarce1O54941 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Smarce1O54941 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.81■□□□□ 0.44
Smarce1O54941 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.81■□□□□ 0.44
Smarce1O54941 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.81■□□□□ 0.44
Smarce1O54941 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.81■□□□□ 0.44
Smarce1O54941 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Smarce1O54941 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Smarce1O54941 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.81■□□□□ 0.44
Smarce1O54941 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarce1O54941 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Smarce1O54941 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Smarce1O54941 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Smarce1O54941 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.8■□□□□ 0.44
Smarce1O54941 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smarce1O54941 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Gm18669-201ENSMUST00000216049 778 ntBASIC17.8■□□□□ 0.44
Smarce1O54941 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smarce1O54941 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.8■□□□□ 0.44
Smarce1O54941 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.8■□□□□ 0.44
Smarce1O54941 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.8■□□□□ 0.44
Smarce1O54941 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smarce1O54941 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarce1O54941 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Smarce1O54941 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smarce1O54941 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smarce1O54941 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.79■□□□□ 0.44
Smarce1O54941 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.79■□□□□ 0.44
Smarce1O54941 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.79■□□□□ 0.44
Smarce1O54941 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smarce1O54941 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smarce1O54941 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.79■□□□□ 0.44
Smarce1O54941 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smarce1O54941 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smarce1O54941 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smarce1O54941 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarce1O54941 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smarce1O54941 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.78■□□□□ 0.44
Smarce1O54941 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarce1O54941 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Smarce1O54941 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.78■□□□□ 0.44
Smarce1O54941 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.78■□□□□ 0.44
Smarce1O54941 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarce1O54941 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms