Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.1■□□□□ 0.17
Nr1i3O35627 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nr1i3O35627 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1i3O35627 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Nr1i3O35627 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.09■□□□□ 0.17
Nr1i3O35627 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nr1i3O35627 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Gm9103-201ENSMUST00000119371 405 ntBASIC16.09■□□□□ 0.17
Nr1i3O35627 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nr1i3O35627 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1i3O35627 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1i3O35627 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1i3O35627 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nr1i3O35627 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.08■□□□□ 0.16
Nr1i3O35627 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nr1i3O35627 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Nr1i3O35627 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.08■□□□□ 0.16
Nr1i3O35627 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1i3O35627 Gm6550-201ENSMUST00000187574 993 ntBASIC16.08■□□□□ 0.16
Nr1i3O35627 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.08■□□□□ 0.16
Nr1i3O35627 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1i3O35627 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1i3O35627 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Nr1i3O35627 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1i3O35627 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1i3O35627 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1i3O35627 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1i3O35627 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.08■□□□□ 0.16
Nr1i3O35627 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Nr1i3O35627 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1i3O35627 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Nr1i3O35627 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nr1i3O35627 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.07■□□□□ 0.16
Nr1i3O35627 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1i3O35627 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nr1i3O35627 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Nr1i3O35627 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.06■□□□□ 0.16
Nr1i3O35627 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Nr1i3O35627 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1i3O35627 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms