Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptch2O35595 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptch2O35595 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptch2O35595 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptch2O35595 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Ptch2O35595 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptch2O35595 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptch2O35595 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptch2O35595 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.35■□□□□ 0.05
Ptch2O35595 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ptch2O35595 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ptch2O35595 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Gm16026-204ENSMUST00000162652 683 ntBASIC15.34■□□□□ 0.05
Ptch2O35595 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.34■□□□□ 0.05
Ptch2O35595 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ptch2O35595 Gm27622-201ENSMUST00000183779 60 ntBASIC15.34■□□□□ 0.05
Ptch2O35595 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.34■□□□□ 0.05
Ptch2O35595 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.34■□□□□ 0.05
Ptch2O35595 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.34■□□□□ 0.05
Ptch2O35595 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptch2O35595 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptch2O35595 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptch2O35595 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ptch2O35595 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
Ptch2O35595 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptch2O35595 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ptch2O35595 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ptch2O35595 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
Ptch2O35595 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ptch2O35595 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.33■□□□□ 0.04
Ptch2O35595 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.33■□□□□ 0.04
Ptch2O35595 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.33■□□□□ 0.04
Ptch2O35595 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Ptch2O35595 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ptch2O35595 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ptch2O35595 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.33■□□□□ 0.04
Ptch2O35595 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.33■□□□□ 0.04
Ptch2O35595 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptch2O35595 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ptch2O35595 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ptch2O35595 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ptch2O35595 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.32■□□□□ 0.04
Ptch2O35595 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ptch2O35595 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.32■□□□□ 0.04
Ptch2O35595 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Ptch2O35595 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.32■□□□□ 0.04
Ptch2O35595 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.32■□□□□ 0.04
Ptch2O35595 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.32■□□□□ 0.04
Ptch2O35595 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.32■□□□□ 0.04
Ptch2O35595 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptch2O35595 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Ptch2O35595 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ptch2O35595 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptch2O35595 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ptch2O35595 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ptch2O35595 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms