Protein–RNA interactions for Protein: O35464

Sema6a, Semaphorin-6A, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema6aO35464 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sema6aO35464 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema6aO35464 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema6aO35464 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Sema6aO35464 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sema6aO35464 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema6aO35464 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sema6aO35464 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema6aO35464 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema6aO35464 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.4□□□□□ -0.1
Sema6aO35464 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sema6aO35464 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sema6aO35464 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.39□□□□□ -0.11
Sema6aO35464 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.39□□□□□ -0.11
Sema6aO35464 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sema6aO35464 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.39□□□□□ -0.11
Sema6aO35464 Mir6404-201ENSMUST00000183699 94 ntBASIC14.39□□□□□ -0.11
Sema6aO35464 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.39□□□□□ -0.11
Sema6aO35464 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.39□□□□□ -0.11
Sema6aO35464 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sema6aO35464 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sema6aO35464 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.39□□□□□ -0.11
Sema6aO35464 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sema6aO35464 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Sema6aO35464 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sema6aO35464 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Gm24589-201ENSMUST00000116692 94 ntBASIC14.38□□□□□ -0.11
Sema6aO35464 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.38□□□□□ -0.11
Sema6aO35464 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.38□□□□□ -0.11
Sema6aO35464 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Sema6aO35464 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.38□□□□□ -0.11
Sema6aO35464 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.38□□□□□ -0.11
Sema6aO35464 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.38□□□□□ -0.11
Sema6aO35464 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Sema6aO35464 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sema6aO35464 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sema6aO35464 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Sema6aO35464 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.37□□□□□ -0.11
Sema6aO35464 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.37□□□□□ -0.11
Sema6aO35464 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Sema6aO35464 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Sema6aO35464 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sema6aO35464 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sema6aO35464 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sema6aO35464 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sema6aO35464 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms