Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sh2b3O09039 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sh2b3O09039 Gm14722-201ENSMUST00000118943 689 ntBASIC13.34□□□□□ -0.27
Sh2b3O09039 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.34□□□□□ -0.27
Sh2b3O09039 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.34□□□□□ -0.27
Sh2b3O09039 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.34□□□□□ -0.27
Sh2b3O09039 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Gm44492-201ENSMUST00000197012 141 ntBASIC13.34□□□□□ -0.27
Sh2b3O09039 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.34□□□□□ -0.27
Sh2b3O09039 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Sh2b3O09039 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.34□□□□□ -0.27
Sh2b3O09039 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.34□□□□□ -0.27
Sh2b3O09039 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.34□□□□□ -0.27
Sh2b3O09039 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Sh2b3O09039 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh2b3O09039 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Sh2b3O09039 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.33□□□□□ -0.27
Sh2b3O09039 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Sh2b3O09039 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh2b3O09039 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Sh2b3O09039 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Gm14701-201ENSMUST00000117156 348 ntBASIC13.33□□□□□ -0.28
Sh2b3O09039 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.33□□□□□ -0.28
Sh2b3O09039 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.33□□□□□ -0.28
Sh2b3O09039 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.33□□□□□ -0.28
Sh2b3O09039 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.33□□□□□ -0.28
Sh2b3O09039 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.33□□□□□ -0.28
Sh2b3O09039 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.33□□□□□ -0.28
Sh2b3O09039 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.33□□□□□ -0.28
Sh2b3O09039 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh2b3O09039 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.33□□□□□ -0.28
Sh2b3O09039 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Gm15920-201ENSMUST00000118998 402 ntBASIC13.32□□□□□ -0.28
Sh2b3O09039 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.32□□□□□ -0.28
Sh2b3O09039 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh2b3O09039 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.32□□□□□ -0.28
Sh2b3O09039 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh2b3O09039 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.32□□□□□ -0.28
Sh2b3O09039 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh2b3O09039 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms