Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trove2O08848 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.41■□□□□ 0.06
Trove2O08848 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trove2O08848 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.41■□□□□ 0.06
Trove2O08848 Mir3081-201ENSMUST00000175305 84 ntBASIC15.41■□□□□ 0.06
Trove2O08848 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.41■□□□□ 0.06
Trove2O08848 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Trove2O08848 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.41■□□□□ 0.06
Trove2O08848 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.41■□□□□ 0.06
Trove2O08848 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.4■□□□□ 0.06
Trove2O08848 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trove2O08848 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Trove2O08848 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.4■□□□□ 0.06
Trove2O08848 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trove2O08848 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.4■□□□□ 0.06
Trove2O08848 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trove2O08848 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Trove2O08848 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.4■□□□□ 0.06
Trove2O08848 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trove2O08848 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trove2O08848 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.4■□□□□ 0.06
Trove2O08848 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trove2O08848 Rubie-203ENSMUST00000227803 2430 ntBASIC15.39■□□□□ 0.05
Trove2O08848 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.39■□□□□ 0.05
Trove2O08848 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trove2O08848 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
Trove2O08848 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trove2O08848 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.39■□□□□ 0.05
Trove2O08848 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.39■□□□□ 0.05
Trove2O08848 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trove2O08848 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trove2O08848 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trove2O08848 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trove2O08848 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trove2O08848 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trove2O08848 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trove2O08848 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trove2O08848 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trove2O08848 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.38■□□□□ 0.05
Trove2O08848 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms