Protein–RNA interactions for Protein: J3QK38

Gm21244, MCG116195, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21244J3QK38 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.12□□□□□ -0.47
Gm21244J3QK38 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.12□□□□□ -0.47
Gm21244J3QK38 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm21244J3QK38 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.11□□□□□ -0.47
Gm21244J3QK38 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.11□□□□□ -0.47
Gm21244J3QK38 Gm4459-201ENSMUST00000118750 468 ntBASIC12.11□□□□□ -0.47
Gm21244J3QK38 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.11□□□□□ -0.47
Gm21244J3QK38 Olfr129-201ENSMUST00000122318 993 ntBASIC12.11□□□□□ -0.47
Gm21244J3QK38 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Gm27742-201ENSMUST00000184667 60 ntBASIC12.11□□□□□ -0.47
Gm21244J3QK38 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm21244J3QK38 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms