Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb9E9Q5G2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb9E9Q5G2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb9E9Q5G2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb9E9Q5G2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb9E9Q5G2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb9E9Q5G2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb9E9Q5G2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Pcdhb9E9Q5G2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Gm8396-201ENSMUST00000057361 823 ntBASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb9E9Q5G2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Gm43474-201ENSMUST00000196415 774 ntBASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb9E9Q5G2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms