Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.42□□□□□ -0.26
Shank1D3YZU1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.42□□□□□ -0.26
Shank1D3YZU1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Gm12859-201ENSMUST00000117834 427 ntBASIC13.41□□□□□ -0.26
Shank1D3YZU1 Gm38225-201ENSMUST00000194001 393 ntBASIC13.41□□□□□ -0.26
Shank1D3YZU1 Gm42612-201ENSMUST00000197986 623 ntBASIC13.41□□□□□ -0.26
Shank1D3YZU1 Gm43170-201ENSMUST00000199827 612 ntBASIC13.41□□□□□ -0.26
Shank1D3YZU1 Gm44344-201ENSMUST00000200287 129 ntBASIC13.41□□□□□ -0.26
Shank1D3YZU1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.41□□□□□ -0.26
Shank1D3YZU1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.41□□□□□ -0.26
Shank1D3YZU1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shank1D3YZU1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.41□□□□□ -0.26
Shank1D3YZU1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.4□□□□□ -0.26
Shank1D3YZU1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Gm12138-201ENSMUST00000122180 951 ntBASIC13.4□□□□□ -0.26
Shank1D3YZU1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.4□□□□□ -0.26
Shank1D3YZU1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.4□□□□□ -0.26
Shank1D3YZU1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Shank1D3YZU1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.27
Shank1D3YZU1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Shank1D3YZU1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Gm15321-201ENSMUST00000121290 288 ntBASIC13.39□□□□□ -0.27
Shank1D3YZU1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Gm16026-204ENSMUST00000162652 683 ntBASIC13.39□□□□□ -0.27
Shank1D3YZU1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.39□□□□□ -0.27
Shank1D3YZU1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms