Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.24■□□□□ 0.83
Tmf1B9EKI3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmf1B9EKI3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmf1B9EKI3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.21■□□□□ 0.83
Tmf1B9EKI3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Mir6990-201ENSMUST00000183724 91 ntBASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Gm44335-201ENSMUST00000196879 141 ntBASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Gm44297-201ENSMUST00000198304 141 ntBASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Gm44346-201ENSMUST00000198851 141 ntBASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tmf1B9EKI3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmf1B9EKI3 Trav13-3-201ENSMUST00000117226 336 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms