Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.21□□□□□ -0.61
Col6a5A6H584 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Col6a5A6H584 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.21□□□□□ -0.61
Col6a5A6H584 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Col6a5A6H584 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 Gm27341-201ENSMUST00000183570 106 ntBASIC11.21□□□□□ -0.61
Col6a5A6H584 Gm43758-201ENSMUST00000199500 367 ntBASIC11.21□□□□□ -0.61
Col6a5A6H584 Gm7783-201ENSMUST00000204795 781 ntBASIC11.21□□□□□ -0.61
Col6a5A6H584 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.21□□□□□ -0.61
Col6a5A6H584 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.21□□□□□ -0.61
Col6a5A6H584 Gm45606-201ENSMUST00000209836 2795 ntBASIC11.21□□□□□ -0.61
Col6a5A6H584 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a5A6H584 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a5A6H584 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.21□□□□□ -0.62
Col6a5A6H584 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.21□□□□□ -0.62
Col6a5A6H584 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a5A6H584 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a5A6H584 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a5A6H584 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a5A6H584 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a5A6H584 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a5A6H584 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Col6a5A6H584 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a5A6H584 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.21□□□□□ -0.62
Col6a5A6H584 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a5A6H584 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.2□□□□□ -0.62
Col6a5A6H584 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.2□□□□□ -0.62
Col6a5A6H584 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.2□□□□□ -0.62
Col6a5A6H584 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC11.2□□□□□ -0.62
Col6a5A6H584 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.2□□□□□ -0.62
Col6a5A6H584 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.2□□□□□ -0.62
Col6a5A6H584 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Col6a5A6H584 Gm12384-201ENSMUST00000119228 919 ntBASIC11.2□□□□□ -0.62
Col6a5A6H584 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.2□□□□□ -0.62
Col6a5A6H584 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.2□□□□□ -0.62
Col6a5A6H584 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.2□□□□□ -0.62
Col6a5A6H584 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a5A6H584 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.19□□□□□ -0.62
Col6a5A6H584 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm5479-201ENSMUST00000160578 435 ntBASIC11.19□□□□□ -0.62
Col6a5A6H584 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm8652-201ENSMUST00000181363 964 ntBASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm45453-201ENSMUST00000211758 853 ntBASIC11.19□□□□□ -0.62
Col6a5A6H584 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a5A6H584 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm14263-201ENSMUST00000117955 746 ntBASIC11.19□□□□□ -0.62
Col6a5A6H584 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms