Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3n-3A0A0G2JEM0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms