Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav21-dv12A0A075B6C4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gm13418-201ENSMUST00000119097 944 ntBASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gm11780-201ENSMUST00000136880 516 ntBASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav21-dv12A0A075B6C4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav21-dv12A0A075B6C4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm9103-201ENSMUST00000119371 405 ntBASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav21-dv12A0A075B6C4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms