Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm8825-201ENSMUST00000182565 998 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm4518-201ENSMUST00000182638 718 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav6-5A0A075B6B5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav6-5A0A075B6B5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6-5A0A075B6B5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms