Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16nA0A075B634 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16nA0A075B634 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav16nA0A075B634 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav16nA0A075B634 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16nA0A075B634 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16nA0A075B634 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16nA0A075B634 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav16nA0A075B634 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Gm43799-201ENSMUST00000201845 579 ntBASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16nA0A075B634 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16nA0A075B634 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16nA0A075B634 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Trav16nA0A075B634 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16nA0A075B634 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav16nA0A075B634 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms