Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Gm8318-201ENSMUST00000182954 872 ntBASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
H2afb3S4R1G7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb3S4R1G7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Gm18669-201ENSMUST00000216049 778 ntBASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb3S4R1G7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
H2afb3S4R1G7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms