Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Gm2272-201ENSMUST00000194903 582 ntBASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmg20bQ9Z104 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmg20bQ9Z104 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hmg20bQ9Z104 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Psmb5-202ENSMUST00000227257 622 ntBASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmg20bQ9Z104 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Hmg20bQ9Z104 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.64■□□□□ 0.41
Hmg20bQ9Z104 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms