Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcb1Q9Z0H3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Gm18049-201ENSMUST00000208909 581 ntBASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcb1Q9Z0H3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Smarcb1Q9Z0H3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcb1Q9Z0H3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcb1Q9Z0H3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcb1Q9Z0H3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.52■□□□□ 0.07
Smarcb1Q9Z0H3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcb1Q9Z0H3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms