Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RpgrQ9R0X5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RpgrQ9R0X5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RpgrQ9R0X5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RpgrQ9R0X5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RpgrQ9R0X5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RpgrQ9R0X5 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms