Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Sybu-209ENSMUST00000228639 4113 ntBASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk3aQ9JKX8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Rpph1-201ENSMUST00000175096 319 ntBASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk3aQ9JKX8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Gm4995-201ENSMUST00000117247 432 ntBASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk3aQ9JKX8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Gm25911-201ENSMUST00000157621 56 ntBASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Gm20553-201ENSMUST00000204205 844 ntBASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.4□□□□□ -0.1
Upk3aQ9JKX8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3aQ9JKX8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3aQ9JKX8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3aQ9JKX8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3aQ9JKX8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms