Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Gm18958-201ENSMUST00000174258 762 ntBASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Gm10493-201ENSMUST00000097270 612 ntBASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Smco4Q9JIS3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Smco4Q9JIS3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smco4Q9JIS3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.07□□□□□ -0.48
Smco4Q9JIS3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms