Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Gm14722-201ENSMUST00000118943 689 ntBASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Gm27646-201ENSMUST00000183989 110 ntBASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.92□□□□□ -0.02
Tubb3Q9ERD7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Gm8344-201ENSMUST00000119813 856 ntBASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubb3Q9ERD7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Gm27628-201ENSMUST00000184911 107 ntBASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Gm37935-201ENSMUST00000192012 982 ntBASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubb3Q9ERD7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms