Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Gm27525-201ENSMUST00000184465 107 ntBASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col4a3bpQ9EQG9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Gm13036-201ENSMUST00000117799 748 ntBASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Gm12134-201ENSMUST00000122109 520 ntBASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Col4a3bpQ9EQG9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a3bpQ9EQG9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a3bpQ9EQG9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms