Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Gm15372-201ENSMUST00000120729 834 ntBASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Gm27357-201ENSMUST00000183754 135 ntBASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ska1Q9CPV1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ska1Q9CPV1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms